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Project Description

We are developing data standards and software tools that implement these standards to develop a systemic approach to modeling, capturing, analyzing and disseminating flow cytometry data.

System Requirements

System requirement is not defined

Download Package list

Latest 5 files
Name Size Date Download count
FlowJo Transformations Lookup Tables 2020.zip 13.9 MB 2020-08-14 05:32 1
GatingML2Utils.src.zip 159.6 KB 2020-04-29 09:16 1
CsvToFcs.v4.zip 719.4 KB 2015-11-10 02:55 63
FCSUtilities20150922.zip 9.3 MB 2015-09-23 04:54 19
flowrepository-public_20141203.zip 408.8 MB 2014-12-04 07:50 10
All Files
Flow Cytometry Transformations
FlowJo Transformations Lookup Tables 2020.zip13.9 MB2020-08-14 05:321
FlowRepository
GatingML2Utils.src.zip159.6 KB2020-04-29 09:161
flowrepository-public_20141203.zip408.8 MB2014-12-04 07:5010
Configured.jruby.Ubuntu64_20141127.zip148.3 MB2014-11-28 03:076
FlowRepository.Server.Installation.Instructions.pdf101.7 KB2012-08-10 02:3924
GenePattern Flow Cytometry Suite
CSV2FCS
CsvToFcs.v4.zip719.4 KB2015-11-10 02:5563
GPFCMSuite.pdf517.7 KB2010-05-04 05:3125
SetFCSKeywords
SetFCSKeywords.zip1.1 MB2009-10-24 02:266
PreviewFCS
PreviewFCS.zip1.6 MB2009-10-24 02:2614
MergeFCSDataFiles
MergeFCSDataFiles.zip976.2 KB2009-10-24 02:2512
LogicleTransform
LogicleTransform.zip585.1 KB2009-10-24 02:255
FCS2CSV
FCS2CSV.zip908.4 KB2009-10-24 02:2587
ExtractFCSParameters
ExtractFCSParameters.zip490.2 KB2009-10-24 02:242
ExtractFCSKeywords
ExtractFCSKeywords.zip978.4 KB2009-10-24 02:243
ExtractFCSDataset
ExtractFCSDataset.zip488.9 KB2009-10-24 02:232
AnonymizeFCS
AnonymizeFCS.zip241.5 KB2009-10-24 02:220
AddFCSParameter
AddFCSParameter.zip700.4 KB2009-10-24 02:211
AddFCSEventIndex
AddFCSEventIndex.zip499.7 KB2009-10-24 02:210
FCS
FCS Utilities
FCSUtilities20150922.zip9.3 MB2015-09-23 04:5419
CFCS.091019.zip549.7 KB2010-05-26 03:2049
FCS3.1
FCS31_Normative_Proposal_20081027.pdf109.8 KB2008-10-28 09:0131
Gating-ML
Gating-ML 2.0
GatingML_2.0_Specification.20130122.full.zip2.2 MB2013-12-19 02:287
GatingML_2.0_Specification.20130122.pdf1.4 MB2013-12-19 02:2822
Gating-ML 1.5
Gating-ML.v1.5.081030.Compliance-tests.081030.zip2.2 MB2008-10-31 05:523
Gating-ML.v1.5.081030.full.zip2.8 MB2008-10-31 05:512
Gating-ML.v1.5.081030.pdf1.7 MB2008-10-31 05:5127
EllipseCalculations.xls24.5 KB2008-07-15 07:502
ICEFormat
CR_1.0_20110601
Attachment 2 - Full specification.zip15.6 MB2011-09-28 04:489
Attachment 1 - Specification text only.pdf168.3 KB2011-09-28 04:4824
readme.txt0.3 KB2011-07-01 01:547
MIFlowCyt
MIFlowCyt 1.0
flowsite_demo.wmv58.6 MB2011-03-18 12:406
MIFlowCyt_Summary_v080220.pdf18.2 KB2008-02-27 01:5932
MIFlowCyt_Rec_v080221.pdf75.4 KB2008-02-27 01:5914
Archival Cytometry Standard
Examples
Example01.acs55.9 MB2010-11-26 05:4411
Obsolete
ACSTOC_XMLXSD_20080725.zip14.8 KB2008-10-24 06:144
ACS_Container_Usage_Recommendation.draft.080812.pdf176.2 KB2008-10-24 06:1019
Conventions_080102.pdf89.0 KB2008-01-03 07:2318
Gating-ML.txt0.3 KB2007-11-17 02:407
ZIP_for_ACS_071016.pdf34.9 KB2007-10-17 02:5532
Requirements-v070920.pdf48.9 KB2007-10-11 07:2115
NetCDF-ListMode-ExampleTestFiles_v071010.zip11.2 MB2007-10-11 06:3013
OldFiles
FCS31_Normative_20081027.pdf109.8 KB2008-10-28 09:0022
ComplianceTests_FAQs_and_Issues_20081007.zip5.5 MB2008-10-08 08:311
Gating-ML.v1.5.081007.pdf1.7 MB2008-10-08 08:3019
Gating-ML.v1.5.081007.Compliance-tests.081007.zip2.0 MB2008-10-08 08:301
Gating-ML.v1.5.081007.full.zip2.8 MB2008-10-08 08:292
ComplianceTests_FAQs_and_Issues_20081003.zip5.4 MB2008-10-04 02:071
Gating-ML.v1.5.080311.Compliance-tests.080902.zip3.9 MB2008-09-03 09:085
Gating-ML.v1.5.080311.Compliance-tests.0804.zip2.2 MB2008-04-05 11:003
Usage.example.acz1.2 MB2008-03-25 12:533
Extension.example.zip2.8 KB2008-03-25 12:522
Gating-ML.v1.5.080311.full.zip3.0 MB2008-03-12 08:572
Gating-ML.v1.5.080311.pdf2.1 MB2008-03-12 08:5719
Gating-ML.v1.5.080120.full.zip2.8 MB2008-01-21 07:073
Gating-ML.v1.5.080120.pdf1.7 MB2008-01-21 07:0710
Gating-ML.v1.5.071220.full.zip3.7 MB2007-12-21 08:461
Gating-ML.v1.5.071220.pdf2.3 MB2007-12-21 08:4616
Conventions_071220.pdf87.5 KB2007-12-21 06:3310
Gating-ML.v1.5.071217.full.zip3.7 MB2007-12-18 09:501
Gating-ML.v1.5.071217.pdf2.3 MB2007-12-18 09:5013
Rationale_for_transformations_in_Gating-ML.pdf104.5 KB2007-12-13 07:2422
Gating-ML.v1.5.071205.full.zip3.6 MB2007-12-06 08:011
Gating-ML.v1.5.071205.pdf2.3 MB2007-12-06 08:0114
Gating-ML.v1.5.071126.full.zip3.6 MB2007-11-27 08:392
Gating-ML.v1.5.071126.pdf2.3 MB2007-11-27 08:3910
Gating-ML.v1.5.071115.full.zip3.4 MB2007-11-16 03:111
Gating-ML.v1.5.071115.pdf1.8 MB2007-11-16 03:1122
MIFlowCyt.v071101.pdf268.8 KB2007-11-02 05:0613
MIFlowCyt_v071101.pdf268.8 KB2007-11-02 04:4615
MIFlowCyt_v070917.pdf63.1 KB2007-11-02 02:207
Conventions_071011.pdf82.9 KB2007-10-12 04:4026
Conventions071011.pdf83.0 KB2007-10-12 03:289
Reqv0.2.zip83.7 KB2007-07-27 01:193
Compensation-ML.v1.1.01.zip861.4 KB2007-07-21 02:426
Gating-ML.v1.3.pdf731.3 KB2007-07-13 03:2516
Gating-ML.v1.3.zip3.4 MB2007-07-13 03:255
FlowRDF.v1.1.pdf505.3 KB2007-07-13 03:1822
Reqv0.1.zip127.1 KB2007-07-13 03:133
Transformation-ML.v1.2.zip3.8 MB2007-07-13 03:102
Transformation-ML.v1.2.pdf823.5 KB2007-07-13 03:0923
Compensation-ML.v1.1.pdf325.9 KB2007-07-13 02:3919
Compensation-ML.v1.1.zip860.2 KB2007-07-13 02:393
MIFlowCyt_normative_standard_proposal_v070525.pdf90.5 KB2007-05-31 05:3429
MIFlowCyt_normative_standard_proposal_v070526.pdf90.5 KB2007-05-31 05:0920
Gating-ML.distribution.v1.2.zip3.0 MB2007-05-18 06:240
MIFlowCyt_v.0.5.04.pdf58.1 KB2007-05-11 07:1414
MIFlowCyt_v.0.4.13.pdf265.9 KB2007-04-17 03:2812
Gating-ML_v1.1.04_test_files.zip1.5 MB2007-03-31 02:024
Gating-ML_v1.1.03_test_files.zip701.8 KB2007-03-07 05:514
acscsv.1.0.1.bin.win32.i386.zip666.0 KB2007-03-06 10:091
Gating-ML_v1.1.02_test_files.zip483.2 KB2007-03-06 02:513
acscsv.1.0.0.bin.RedHatLinux.i386.zip646.0 KB2007-03-04 13:252
acscsv.1.0.0.src.zip697.1 KB2007-03-04 12:581
acscsv.1.0.0.bin.win32.i386.zip656.7 KB2007-03-04 12:583
ACS1_rationale_for_changes.pdf130.8 KB2007-02-13 09:0317
ASC1_v0.8.pdf124.6 KB2007-02-13 09:0317
MIFlowCyt_v.0.3.13.pdf39.2 KB2007-02-09 03:1915
Gating-ML_v1.1_test_files.zip483.2 KB2007-02-06 09:582
Transformation-ML_v1.0_test_files.zip25.6 KB2007-02-06 09:582
Compensation-ML_v1.0_test_files.zip23.3 KB2007-02-06 09:581
Rationale_for_changes_to_FCS3.0.pdf276.5 KB2007-02-03 06:4111
Rationale_for_changes_to_FCS3.pdf130.2 KB2007-02-03 06:1512
MIFlowCyt-README.txt1.4 KB2007-01-23 03:512
Transformation-ML_v1.0.zip9.7 MB2006-12-13 08:533
Compensation-ML_v1.0.zip366.6 KB2006-12-13 08:521
Gating-ML_v1.1.zip703.2 KB2006-12-13 08:522
Transformation-ML_v1.0.pdf396.8 KB2006-12-13 08:4117
Gating-ML_v1.1.pdf433.0 KB2006-12-13 08:4117
Compensation-ML_v1.0.pdf256.7 KB2006-12-13 08:3915
Transformation-ML.v1.0.26.pdf396.8 KB2006-12-13 08:3511
Gating-ML.v1.1.26.pdf433.0 KB2006-12-13 08:3515
Compensation-ML.v1.0.24.pdf256.7 KB2006-12-13 08:3413
Proposa_for_FCS4.pdf275.4 KB2006-12-12 04:2324
Proposal_for_FCS4.0.pdf275.9 KB2006-11-15 08:0917
Proposal_for_FCS4.pdf275.8 KB2006-11-15 04:0027
FCSmixture.zip1.4 MB2006-11-15 02:284
facejava-1.0B1-uml.zip4.3 MB2006-09-23 02:507
MIFACE.v.1.1.pdf196.0 KB2006-09-20 03:5014
MIFACE_worksheet.v.1.1.xls58.5 KB2006-09-20 03:502
Proposal_for_FCS_4.0.pdf272.4 KB2006-09-16 07:1927
Proposal_for_FCS_4.pdf263.3 KB2006-09-15 09:2724
flip_byte_order_performance_test.zip2.4 KB2006-09-02 09:003
wtr.pdf3.6 MB2006-09-02 01:486
FcmMDR.v.1.0.rdfs5.2 KB2006-09-01 08:471
FlowRDF.v1.0.pdf639.4 KB2006-09-01 08:4613
FlowFuGEm3v01.zip560.5 KB2006-09-01 08:193
FlowFuGE.readme.txt1.9 KB2006-09-01 07:571
RFlowCyt.readme.txt0.3 KB2006-08-31 07:572
FACEOntology.readme.txt0.2 KB2006-08-31 07:522
FACEOntology.download.url0.1 KB2006-08-31 07:512
FACEOntology-FuGO.download.url0.1 KB2006-08-31 07:493
readme.FACEOntology.txt0.2 KB2006-08-31 07:482
FACEOntology-FuGO.download.url.url0.1 KB2006-08-31 07:454
readme.txt0.3 KB2006-08-31 07:263
RFlowCyt.download.url0.1 KB2006-08-31 07:213
MIFACE_worksheet.v.1.0.xls57.5 KB2006-08-31 06:073
MIFACE.v.1.0.pdf67.9 KB2006-08-31 06:0717
rflowcyt_1.4.0.tar.gz2.2 MB2006-08-31 05:481
rflowcyt_1.4.0.zip2.7 MB2006-08-31 05:476
rflowcyt_1.4.0.gz2.4 MB2006-08-31 05:463
rflowcyt.pdf11.4 MB2006-08-31 05:458
Transformation-ML.v1.0.pdf397.1 KB2006-08-31 05:1314
Gating-ML.v1.1.pdf432.9 KB2006-08-31 05:0810
Compensation-ML.v1.0.pdf256.5 KB2006-08-31 05:0115
Transformation-ML.v1.0.zip9.7 MB2006-08-31 04:265
Compensation-ML.v1.0.zip366.6 KB2006-08-31 04:231
Gating-ML.v1.1.zip703.2 KB2006-08-31 04:106
Listmode Data Converter
FCS2netCDF 080218
fcs2netcdf-080218-bin.tar.gz2.9 MB2008-02-20 04:111
fcs2netcdf-080218-bin.zip2.9 MB2008-02-20 04:118
fcs2netcdf-080218-doc.tar.gz53.1 KB2008-02-20 04:111
fcs2netcdf-080218-doc.zip138.9 KB2008-02-20 04:111
fcs2netcdf-080218-src.tar.gz22.9 KB2008-02-20 04:113
fcs2netcdf-080218-src.zip31.7 KB2008-02-20 04:111
FlowRDF
FlowRDF 1.1
FlowRDF.v1.1.080215.pdf353.2 KB2008-02-16 06:4628
FACEJava
FACEJava 1.0B1
facejava-1.0B1-src.tar.gz19.6 MB2006-11-15 09:143
facejava-1.0B1-src.zip20.0 MB2006-11-15 08:484
facejava-1.0B1.1-uml.zip5.8 MB2006-10-27 02:251
FACEJava-Introduction.pdf3.6 MB2006-09-04 16:5123
facejava-1.0B1.zip11.7 MB2006-08-31 02:094
facejava-1.0B1.tar.gz11.0 MB2006-08-31 02:085
facejava-1.0B1-docs.zip986.9 KB2006-08-31 02:052
facejava-1.0B1-docs.tar.gz343.4 KB2006-08-31 02:051